STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7B1Q5_CIOINLeishmanolysin-like peptidase. (436 aa)    
Predicted Functional Partners:
LOC100187168
ULP_PROTEASE domain-containing protein.
   
  
 0.539
F6ZID3_CIOIN
Uncharacterized protein; Belongs to the cyclin family.
    
 
 0.482
H2XKH3_CIOIN
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
    
 
 0.482
F6UJF1_CIOIN
UDENN FLCN/SMCR8-type domain-containing protein.
      
 0.481
F6RA92_CIOIN
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
      
 0.478
F6TI28_CIOIN
Mitogen-activated protein kinase.
      
 0.474
LOC100184809
V-type proton ATPase catalytic subunit A-like.
      
 0.418
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.