STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6QK12_CIOINPeptidase S1 domain-containing protein; Belongs to the peptidase S1 family. (187 aa)    
Predicted Functional Partners:
H2XNI5_CIOIN
Ig-like domain-containing protein.
   
 0.998
F7AB73_CIOIN
Uncharacterized protein.
    
 0.983
F6UN86_CIOIN
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.943
gla1
Uncharacterized protein LOC780869.
    
 0.943
H2XRJ3_CIOIN
Protein kinase domain-containing protein.
    
 0.855
H2XUQ8_CIOIN
Uncharacterized protein.
    
 0.855
F6PKR4_CIOIN
Ig-like domain-containing protein.
    
 0.820
H2XX81_CIOIN
Ig-like domain-containing protein.
    
 0.806
F6V7B2_CIOIN
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.675
LOC100184450
Uncharacterized protein.
   
 0.638
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.