STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F7AFC6_CIOINPMT domain-containing protein. (228 aa)    
Predicted Functional Partners:
F6ZXT3_CIOIN
PMT_4TMC domain-containing protein.
 
     0.938
LOC100181205
Protein O-mannosyl-transferase 1-like isoform X1.
  
 
 0.917
F6Z402_CIOIN
Peptidase S72 domain-containing protein.
    
 0.827
H2Y1K5_CIOIN
Uncharacterized protein.
   
  
 0.654
F7A693_CIOIN
ILEI domain-containing protein.
      
 0.642
LOC100183658
NTP_transferase domain-containing protein.
   
 
 0.578
F7B8N2_CIOIN
Uncharacterized protein.
   
  
 0.552
LOC100180591
Dolichol-phosphate mannosyltransferase subunit 1; Transfers mannose from GDP-mannose to dolichol monophosphate to form dolichol phosphate mannose (Dol-P-Man) which is the mannosyl donor in pathways leading to N-glycosylation, glycosyl phosphatidylinositol membrane anchoring, and O-mannosylation of proteins.
   
 
 0.539
H2Y2W3_CIOIN
Hexosyltransferase.
      
 0.539
LOC100181040
D-ribitol-5-phosphate cytidylyltransferase-like isoform X2.
    
 
 0.485
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.