STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6SY22_CIOINUncharacterized protein. (307 aa)    
Predicted Functional Partners:
LOC100177721
WD_REPEATS_REGION domain-containing protein.
   
 0.748
efhc2
EFHC2 protein.
   
 
 0.648
F7A2F3_CIOIN
Uncharacterized protein.
   
   0.588
H2XMC6_CIOIN
Uncharacterized protein.
    
 0.576
LOC100185443
Protein Flattop-like.
   
 
 0.574
F7A7P7_CIOIN
Enkurin domain-containing protein.
   
 
 0.573
LOC100179482
Stabilizer of axonemal microtubules 2.
   
 
 0.569
LOC100186799
Leucine-rich repeat and coiled-coil domain-containing protein 1 isoform X1.
    
 0.553
zf(c2h2)-149
Zinc finger protein (C2H2)-149.
   
    0.552
LOC100182799
Uncharacterized protein.
   
 
 0.547
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.