STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6WVH2_CIOINUncharacterized protein. (385 aa)    
Predicted Functional Partners:
F6SGU7_CIOIN
Uncharacterized protein.
     
 0.941
H2Y2E8_CIOIN
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
   
 0.931
LOC100181257
Ethanolaminephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.922
LOC100179127
Phosphatidylserine synthase 1-like.
  
  
0.916
F6U8Q9_CIOIN
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
     
 0.913
F6Q6W6_CIOIN
Uncharacterized protein.
  
  
 
0.901
LOC100186495
Lysophospholipid acyltransferase 5; Belongs to the membrane-bound acyltransferase family.
     
  0.900
H2XNK7_CIOIN
Uncharacterized protein.
     
  0.900
LOC100183857
Choline dehydrogenase.
     
  0.800
F6PVL8_CIOIN
Phospholipase A(2).
     
  0.650
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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