LOC100182208 protein (Ciona intestinalis) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

LOC100182208

Uncharacterized protein. (493 aa)

Predicted Functional Partners:

F7ACG4_CIOIN

0.704

LOC100175056

0.696

LOC100181722

0.684

H2XJF3_CIOIN

0.641

LOC100180632

0.584

LOC100176748

0.572

H2XNP0_CIOIN

0.536

H2XJH5_CIOIN

0.455

LOC100179535

0.400

Your Current Organism:

Ciona intestinalis

NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F7ACG4_CIOIN	H2XJF3_CIOIN	ENSCINP00000011087	ENSCINP00000010028	WH2 domain-containing protein.	Uncharacterized protein.	0.901
F7ACG4_CIOIN	LOC100175056	ENSCINP00000011087	ENSCINP00000035924	WH2 domain-containing protein.	WASH complex subunit 5 isoform X2.	0.913
F7ACG4_CIOIN	LOC100180632	ENSCINP00000011087	ENSCINP00000000530	WH2 domain-containing protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.481
F7ACG4_CIOIN	LOC100181722	ENSCINP00000011087	ENSCINP00000021710	WH2 domain-containing protein.	WASH complex subunit 3-like.	0.944
F7ACG4_CIOIN	LOC100182208	ENSCINP00000011087	ENSCINP00000027226	WH2 domain-containing protein.	Uncharacterized protein.	0.704
H2XJF3_CIOIN	F7ACG4_CIOIN	ENSCINP00000010028	ENSCINP00000011087	Uncharacterized protein.	WH2 domain-containing protein.	0.901
H2XJF3_CIOIN	LOC100175056	ENSCINP00000010028	ENSCINP00000035924	Uncharacterized protein.	WASH complex subunit 5 isoform X2.	0.945
H2XJF3_CIOIN	LOC100180632	ENSCINP00000010028	ENSCINP00000000530	Uncharacterized protein.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.422
H2XJF3_CIOIN	LOC100181722	ENSCINP00000010028	ENSCINP00000021710	Uncharacterized protein.	WASH complex subunit 3-like.	0.918
H2XJF3_CIOIN	LOC100182208	ENSCINP00000010028	ENSCINP00000027226	Uncharacterized protein.	Uncharacterized protein.	0.641
H2XJH5_CIOIN	H2XNP0_CIOIN	ENSCINP00000029807	ENSCINP00000031273	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.446
H2XJH5_CIOIN	LOC100182208	ENSCINP00000029807	ENSCINP00000027226	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.455
H2XNP0_CIOIN	H2XJH5_CIOIN	ENSCINP00000031273	ENSCINP00000029807	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.446
H2XNP0_CIOIN	LOC100182208	ENSCINP00000031273	ENSCINP00000027226	Uncharacterized protein.	Uncharacterized protein.	0.536
LOC100175056	F7ACG4_CIOIN	ENSCINP00000035924	ENSCINP00000011087	WASH complex subunit 5 isoform X2.	WH2 domain-containing protein.	0.913
LOC100175056	H2XJF3_CIOIN	ENSCINP00000035924	ENSCINP00000010028	WASH complex subunit 5 isoform X2.	Uncharacterized protein.	0.945
LOC100175056	LOC100176748	ENSCINP00000035924	ENSCINP00000009651	WASH complex subunit 5 isoform X2.	Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.	0.408
LOC100175056	LOC100180632	ENSCINP00000035924	ENSCINP00000000530	WASH complex subunit 5 isoform X2.	Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.	0.529
LOC100175056	LOC100181722	ENSCINP00000035924	ENSCINP00000021710	WASH complex subunit 5 isoform X2.	WASH complex subunit 3-like.	0.905
LOC100175056	LOC100182208	ENSCINP00000035924	ENSCINP00000027226	WASH complex subunit 5 isoform X2.	Uncharacterized protein.	0.696