STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6X7G6_CIOINLactamase_B domain-containing protein. (153 aa)    
Predicted Functional Partners:
LOC100175914
Sulfide:quinone oxidoreductase, mitochondrial.
  
 
 0.973
LOC100178002
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
 
 0.966
F6X139_CIOIN
Lactamase_B domain-containing protein.
  
  
 
0.902
LOC100181042
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.628
LOC100176864
Glyoxalase domain-containing protein 4-like isoform X2.
    
 0.608
F6ZE91_CIOIN
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
    
 0.597
H2XQG7_CIOIN
VOC domain-containing protein.
    
 0.597
F6Q9K0_CIOIN
Uncharacterized protein.
   
 0.561
F6U899_CIOIN
DJ-1_PfpI domain-containing protein.
     
 0.528
H2XQX5_CIOIN
WHEP-TRS domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.528
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (18%) [HD]