STRINGSTRING
rl32 protein (Ciona intestinalis) - STRING interaction network
"rl32" - Rl32 protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rl32Rl32 protein (136 aa)    
Predicted Functional Partners:
ENSCING00000004574
Ribosomal protein L19 (206 aa)
   
  0.999
ENSCING00000009310
Uncharacterized protein (191 aa)
   
  0.999
ENSCING00000023083
Uncharacterized protein (256 aa)
   
  0.999
ENSCING00000003326
Uncharacterized protein (178 aa)
   
  0.999
ENSCING00000018496
Uncharacterized protein (58 aa)
     
  0.999
ENSCING00000005083
Uncharacterized protein (154 aa)
   
  0.999
ENSCING00000020198
Uncharacterized protein (133 aa)
   
  0.999
ENSCING00000011568
Uncharacterized protein (183 aa)
   
  0.999
Cin.18922
40S ribosomal protein S6 (248 aa)
     
  0.999
ENSCING00000008014
Uncharacterized protein (281 aa)
   
  0.999
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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