STRINGSTRING
tpr protein (Ciona intestinalis) - STRING interaction network
"tpr" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tprUncharacterized protein (1086 aa)    
Predicted Functional Partners:
ENSCING00000014720
Uncharacterized protein (610 aa)
     
  0.936
Cin.31768
Uncharacterized protein (814 aa)
     
  0.935
ENSCING00000007054
Uncharacterized protein (428 aa)
     
  0.855
zf(rbz)-2
Zinc finger protein (1304 aa)
     
  0.850
ENSCING00000007444
Uncharacterized protein (329 aa)
       
  0.847
ENSCING00000013568
Uncharacterized protein (260 aa)
     
  0.824
ENSCING00000011252
Uncharacterized protein (1037 aa)
     
 
  0.813
ENSCING00000010138
Uncharacterized protein (187 aa)
     
 
  0.807
ENSCING00000004629
Uncharacterized protein (219 aa)
     
 
  0.807
ENSCING00000009527
Uncharacterized protein (828 aa)
     
  0.793
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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