STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6XPV2_CIOINSKICH domain-containing protein. (250 aa)    
Predicted Functional Partners:
LOC100186367
Gamma-aminobutyric acid receptor-associated protein.
   
 0.936
LOC101242557
RING-type domain-containing protein.
   
 
 0.711
Q1RPY5_CIOIN
Zinc finger protein.
    
 0.700
ikk-epsilon
ikappaB kinase isoform X1.
    
 0.640
LOC100184240
Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.636
F6T4G2_CIOIN
N_BRCA1_IG domain-containing protein.
   
 
 0.547
H2XXB3_CIOIN
Uncharacterized protein.
    
 0.544
F6SYE0_CIOIN
Protein kinase domain-containing protein.
    
 0.537
F6UY41_CIOIN
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.515
F6ZJN8_CIOIN
Uncharacterized protein.
   
 0.483
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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