STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XJG5_CIOINUncharacterized protein; Belongs to the protein kinase superfamily. (458 aa)    
Predicted Functional Partners:
H2XK39_CIOIN
Protein kinase domain-containing protein.
  
0.909
Raf1
Uncharacterized protein.
   
0.908
F6XR36_CIOIN
Protein kinase domain-containing protein.
  
0.846
erk1/2
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
0.744
Erk5
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
0.744
erk3/4
Protein kinase domain-containing protein.
  
 
0.706
F6TI28_CIOIN
Mitogen-activated protein kinase.
   
0.685
LOC100176155
Uncharacterized protein.
     
 0.624
Rap1b
Uncharacterized protein.
    
 0.615
LOC100185663
Vinculin.
     
 0.614
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (6%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.