STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XJL6_CIOINUncharacterized protein. (259 aa)    
Predicted Functional Partners:
adh3
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 
 0.940
H2XJR2_CIOIN
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
0.930
LOC100176963
Retinal dehydrogenase 1-like; Belongs to the aldehyde dehydrogenase family.
  
 0.920
F6W5P6_CIOIN
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
  
 0.920
LOC100180469
Retinal dehydrogenase 2.
  
 0.920
LOC100183764
Aldehyde dehydrogenase, mitochondrial; Belongs to the aldehyde dehydrogenase family.
  
 0.920
H2XZV0_CIOIN
Aldedh domain-containing protein.
  
 0.920
F6YG59_CIOIN
Uncharacterized protein.
    
 0.910
LOC100181359
Retinol dehydrogenase 14-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.910
bco
Uncharacterized protein.
     
 0.910
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (20%) [HD]