STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XJQ6_CIOINPH domain-containing protein. (181 aa)    
Predicted Functional Partners:
F6R1I0_CIOIN
Uncharacterized protein.
   
 0.898
LOC445772
Guanine nucleotide-binding protein G(Q) subunit alpha isoform X1.
   
 0.898
rhoc
RhoA protein.
   
 0.736
LOC100185717
Uncharacterized protein.
   
 0.731
cdc42
Uncharacterized protein.
   
 0.721
LOC448957
Rac4 protein.
   
 0.721
Rac3a
Uncharacterized protein.
   
 0.721
LOC448958
Rac5 protein.
   
 0.721
LOC445702
Rac1 protein isoform X1.
   
 0.721
rcl2
Rac and Cdc42-like 2 protein isoform X1.
   
 0.721
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.