STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XNF7_CIOINUncharacterized protein. (342 aa)    
Predicted Functional Partners:
LOC100185960
Beta-1,4-galactosyltransferase 1.
  
  
 
0.911
F6XTL0_CIOIN
Uncharacterized protein.
  
  
 
0.910
F6QK87_CIOIN
Uncharacterized protein.
    
 0.906
LOC100184787
Hexosyltransferase.
   
 
 0.902
LOC100180134
Hexosyltransferase.
   
 
 0.902
H2XRS7_CIOIN
Hexosyltransferase.
   
 
 0.902
LOC100180782
Hexosyltransferase.
   
 
 0.902
H2XTZ0_CIOIN
Hexosyltransferase.
   
 
 0.902
H2XVC8_CIOIN
Hexosyltransferase.
   
 
 0.902
F6U2D9_CIOIN
Hexosyltransferase.
     
 0.901
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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