STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XNI5_CIOINIg-like domain-containing protein. (202 aa)    
Predicted Functional Partners:
F6RHX2_CIOIN
Peptidase S1 domain-containing protein.
   
 0.998
F6QK12_CIOIN
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 0.998
F6XAG7_CIOIN
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
   
 0.998
LOC100182749
VWFA domain-containing protein.
   
 0.959
LOC100185717
Uncharacterized protein.
   
 0.952
cdc42
Uncharacterized protein.
   
 0.952
LOC448957
Rac4 protein.
   
 0.952
Rac3a
Uncharacterized protein.
   
 0.952
LOC448958
Rac5 protein.
   
 0.952
LOC445702
Rac1 protein isoform X1.
   
 0.952
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.