STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XNK1_CIOINUncharacterized protein. (129 aa)    
Predicted Functional Partners:
H2XNV6_CIOIN
DUF3677 domain-containing protein.
   
 0.944
LOC100186018
Integrator complex subunit 11-like.
    
 0.937
LOC100187315
Uncharacterized protein.
   
 0.935
H2XP55_CIOIN
Uncharacterized protein.
    
 0.935
H2XXT7_CIOIN
PHD-type domain-containing protein.
   
 0.934
F6QZ12_CIOIN
Uncharacterized protein.
    
 0.925
F6RSZ1_CIOIN
Uncharacterized protein.
   
 0.919
LOC100179349
Integrator complex subunit 8-like.
   
 0.910
F6YIU9_CIOIN
VWFA domain-containing protein.
    
 0.907
F6QR00_CIOIN
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.870
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (10%) [HD]