STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XNK7_CIOINUncharacterized protein. (96 aa)    
Predicted Functional Partners:
F6SGU7_CIOIN
Uncharacterized protein.
     
  0.900
LOC100186495
Lysophospholipid acyltransferase 5; Belongs to the membrane-bound acyltransferase family.
     
  0.900
F6Q6W6_CIOIN
Uncharacterized protein.
     
  0.900
F6QE16_CIOIN
Uncharacterized protein.
     
  0.900
F6VDV2_CIOIN
SAM domain-containing protein.
     
  0.900
LOC100181257
Ethanolaminephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
  0.900
F6QX80_CIOIN
DAGKc domain-containing protein.
     
  0.900
LOC100178755
Transmembrane protein 189.
     
  0.900
F6U8Q9_CIOIN
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
     
  0.900
F6WVH2_CIOIN
Uncharacterized protein.
     
  0.900
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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