STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XPX4_CIOINProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (165 aa)    
Predicted Functional Partners:
LOC100184659
AMPKBI domain-containing protein.
    
 0.677
F7AIY7_CIOIN
Protein kinase domain-containing protein.
 
      0.665
LOC100176529
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
 0.563
F6V7D4_CIOIN
Protein kinase domain-containing protein.
  
 
  0.546
F6UCD8_CIOIN
Uncharacterized protein.
   
 0.542
F7BH38_CIOIN
Uncharacterized protein.
   
 0.542
gla1
Uncharacterized protein LOC780869.
  
 
  0.482
F6W8V2_CIOIN
Protein kinase domain-containing protein.
  
    0.447
LOC100176030
WD_REPEATS_REGION domain-containing protein.
    
 0.446
F6S4F7_CIOIN
Non-specific serine/threonine protein kinase.
   
0.432
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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