STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100176226Aldose reductase-like. (319 aa)    
Predicted Functional Partners:
F6Q7A6_CIOIN
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.924
H2XY01_CIOIN
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.924
LOC100184485
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 0.921
LOC100175137
Dihydropteridine reductase isoform X2.
   
 0.921
LOC100184593
Sorbitol dehydrogenase.
  
 0.920
LOC100182755
Aldehyde dehydrogenase family 16 member A1-like; Belongs to the aldehyde dehydrogenase family.
   
 
 0.920
LOC100177275
PKS_ER domain-containing protein.
  
 0.919
LOC100175707
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 
 0.918
F6SG33_CIOIN
Uncharacterized protein; Belongs to the FGGY kinase family.
  
 
 0.913
LOC100182286
Carbonyl reductase [NADPH] 1-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.913
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.