STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XRC8_CIOINUncharacterized protein. (1060 aa)    
Predicted Functional Partners:
H2XVQ2_CIOIN
Uncharacterized protein.
    
 0.853
F7AB73_CIOIN
Uncharacterized protein.
 
 
 0.770
H2XNI5_CIOIN
Ig-like domain-containing protein.
   
 0.754
F6VDC4_CIOIN
Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 0.730
LOC100183146
Uncharacterized protein.
    
 0.654
F6Z3J9_CIOIN
Uncharacterized protein.
    
 0.647
H2XQG1_CIOIN
HAP1 N-terminal domain-containing protein.
    
 0.647
LOC100184654
Voltage-dependent anion-selective channel protein 2.
    
 0.640
F6R6J0_CIOIN
Uncharacterized protein.
    
 0.612
H2XJQ6_CIOIN
PH domain-containing protein.
   
 0.562
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.