STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100183719Uncharacterized protein. (231 aa)    
Predicted Functional Partners:
F6WZA5_CIOIN
Uncharacterized protein.
   
 0.993
LOC778651
Tyrosine-protein kinase receptor.
   
 0.950
F6YDP2_CIOIN
Uncharacterized protein.
    
 0.929
F6XIK7_CIOIN
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
   
0.924
F6Y5T9_CIOIN
SH2 domain-containing protein.
   
0.919
F6PQN7_CIOIN
Uncharacterized protein.
   
0.918
F6Y5W9_CIOIN
SAM domain-containing protein.
   
 0.911
LOC100182493
Growth factor receptor-bound protein 2-like isoform X1.
  
  
 
0.902
H2XVQ2_CIOIN
Uncharacterized protein.
     
0.895
F6UN86_CIOIN
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.868
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (24%) [HD]