STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XUG0_CIOINUncharacterized protein. (119 aa)    
Predicted Functional Partners:
F6UMT8_CIOIN
Uncharacterized protein.
 
     0.951
LOC100180174
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 0.920
F6Z9I2_CIOIN
CBS domain-containing protein.
 
 0.873
H2XVN3_CIOIN
PALP domain-containing protein.
  
 0.871
H2XWY3_CIOIN
Uncharacterized protein.
  
 0.834
F6XC87_CIOIN
Hcy-binding domain-containing protein.
  
 
 0.706
LOC100178002
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
  
 0.704
F6UET6_CIOIN
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.679
LOC100184688
Adenosylhomocysteinase; Belongs to the adenosylhomocysteinase family.
  
 0.647
F6SNC6_CIOIN
AdoHcyase_NAD domain-containing protein; Belongs to the adenosylhomocysteinase family.
  
 0.646
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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