STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XWC8_CIOINUncharacterized protein. (223 aa)    
Predicted Functional Partners:
H2XX81_CIOIN
Ig-like domain-containing protein.
    
 0.658
H2XNI5_CIOIN
Ig-like domain-containing protein.
   
 0.648
F6PKR4_CIOIN
Ig-like domain-containing protein.
    
 0.618
LOC100175128
Ryncolin-4.
  
 
  0.617
H2Y3K7_CIOIN
Fibrinogen C-terminal domain-containing protein.
  
 
  0.612
H2Y0T8_CIOIN
Fibrinogen C-terminal domain-containing protein.
  
 
  0.610
H2XLH1_CIOIN
Fibrinogen C-terminal domain-containing protein.
  
 
  0.604
F6V7B2_CIOIN
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.530
F6QQU5_CIOIN
Fibrinogen C-terminal domain-containing protein.
    
  0.523
F6TM76_CIOIN
Uncharacterized protein.
    
  0.523
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.