STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100177985Phospholipid phosphatase 1 isoform X1. (303 aa)    
Predicted Functional Partners:
LOC100187260
2-acylglycerol O-acyltransferase 1.
     
 0.962
F7AYZ1_CIOIN
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
    
 0.959
F6U8Q9_CIOIN
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
     
 0.933
LOC100178248
3-ketodihydrosphingosine reductase-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.927
F6SYF4_CIOIN
Uncharacterized protein.
    
 0.922
F6Z6W8_CIOIN
PlsC domain-containing protein.
    
 0.922
F7A7R4_CIOIN
PlsC domain-containing protein.
    
 0.922
LOC100176558
Lysocardiolipin acyltransferase 1 isoform X2.
    
 0.921
F6W804_CIOIN
PlsC domain-containing protein.
    
 0.921
LOC100181257
Ethanolaminephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.920
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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