STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XX81_CIOINIg-like domain-containing protein. (251 aa)    
Predicted Functional Partners:
tgfbr-ia
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
   
 0.918
tgfbr-ib
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
   
 0.918
H2XRJ3_CIOIN
Protein kinase domain-containing protein.
   
 0.876
H2XUQ8_CIOIN
Uncharacterized protein.
   
 0.876
F6RHX2_CIOIN
Peptidase S1 domain-containing protein.
    
 0.806
F6QK12_CIOIN
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.806
F6XAG7_CIOIN
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.806
LOC100182749
VWFA domain-containing protein.
    
 0.688
F6PKR4_CIOIN
Ig-like domain-containing protein.
    
 0.679
H2XNI5_CIOIN
Ig-like domain-containing protein.
    
 0.663
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.