STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100181653PAW domain-containing protein. (635 aa)    
Predicted Functional Partners:
F7B3P4_CIOIN
Uncharacterized protein.
    
 0.996
LOC100184384
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
    
 0.948
LOC100182082
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.885
F7ANZ8_CIOIN
Uncharacterized protein.
    
 0.867
LOC100187157
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.799
F6VAW2_CIOIN
Uncharacterized protein.
   
 0.753
LOC100175110
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.743
r27a
R27a protein isoform X1.
    
 0.735
LOC100175472
Ubiquilin-1.
    
 0.711
F6YHT4_CIOIN
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 0.708
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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