STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100183296Fatty acid synthase. (227 aa)    
Predicted Functional Partners:
F6S2A1_CIOIN
Uncharacterized protein.
  
 0.907
F6V9L7_CIOIN
ACPS domain-containing protein.
   
 0.818
LOC100181042
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.696
LOC100178149
PKS_AT domain-containing protein.
  
 
 0.654
F6T8Y3_CIOIN
Uncharacterized protein.
  
 
 0.601
F6VDW8_CIOIN
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
  
 
 0.601
F6VDJ9_CIOIN
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
  
 
 0.601
F6T0F1_CIOIN
Uncharacterized protein.
  
  
 0.582
LOC100185641
FA_desaturase domain-containing protein; Belongs to the fatty acid desaturase type 1 family.
   
 
 0.561
LOC100180197
Uncharacterized protein LOC100180197 isoform X1.
  
 
 0.532
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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