STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2XZ12_CIOINUncharacterized protein. (256 aa)    
Predicted Functional Partners:
H2XNI5_CIOIN
Ig-like domain-containing protein.
  
 
 0.621
LOC100182618
Ipi1_N domain-containing protein.
   
 0.541
H2XT96_CIOIN
Neur_chan_memb domain-containing protein.
  
     0.490
Nachr-3
Neur_chan_memb domain-containing protein.
  
     0.478
H2XNV5_CIOIN
Uncharacterized protein.
   
 0.477
H2XQ71_CIOIN
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
     0.449
F6PKR4_CIOIN
Ig-like domain-containing protein.
  
  0.441
F6YG13_CIOIN
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
     0.409
F6RLD4_CIOIN
Uncharacterized protein.
  
     0.406
Nachr-2
Uncharacterized protein.
  
     0.405
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.