STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y092_CIOINUncharacterized protein. (263 aa)    
Predicted Functional Partners:
LOC100175707
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 
 0.920
F6Q7A6_CIOIN
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.916
H2XY01_CIOIN
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
 0.916
LOC100182755
Aldehyde dehydrogenase family 16 member A1-like; Belongs to the aldehyde dehydrogenase family.
   
 
 0.915
LOC100184485
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
   
 
 0.911
LOC100177042
Uncharacterized protein LOC100177042 isoform X1.
  
  
 
0.905
F6XUX1_CIOIN
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
   
 
 0.528
F7BA03_CIOIN
Uncharacterized protein.
    
 0.478
LOC100187496
Hydroxyacyl-coenzyme A dehydrogenase, mitochondrial-like.
    
 0.478
F6S2A1_CIOIN
Uncharacterized protein.
  
  
 0.440
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.