STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y0N7_CIOINPkinase_Tyr domain-containing protein. (196 aa)    
Predicted Functional Partners:
LOC100179989
PPM-type phosphatase domain-containing protein.
   
 0.937
Q1RPY5_CIOIN
Zinc finger protein.
    
 0.937
LOC100184240
Ubiquitin-conjugating enzyme E2 35-like isoform X2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.885
F6VM15_CIOIN
RanBP2-type domain-containing protein.
   
 0.884
Mapkk4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.837
nemo-like
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
 0.728
Q4H3C1_CIOIN
IkappaB kinase.
   
 0.724
mapkk3/6
Protein kinase domain-containing protein.
   
 0.704
F7A1W8_CIOIN
GOLD domain-containing protein.
   
 0.675
F6R544_CIOIN
Uncharacterized protein.
   
 0.661
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (30%) [HD]