STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RhouUncharacterized protein. (259 aa)    
Predicted Functional Partners:
H2XVQ2_CIOIN
Uncharacterized protein.
    
 0.998
H2XNI5_CIOIN
Ig-like domain-containing protein.
   
 0.952
H2XZX6_CIOIN
Phorbol-ester/DAG-type domain-containing protein.
    
 0.736
H2Y3I9_CIOIN
Myosin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.736
H2XVF8_CIOIN
Non-specific serine/threonine protein kinase.
   
 0.728
LOC100175009
Partitioning defective protein 6.
    
 0.724
H2XJQ6_CIOIN
PH domain-containing protein.
   
 0.721
H2XVV8_CIOIN
DH domain-containing protein.
   
 0.721
F6ZCE0_CIOIN
Non-specific serine/threonine protein kinase.
    
 0.719
F7A8L8_CIOIN
Uncharacterized protein.
   
 0.713
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.