STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y1H0_CIOINUncharacterized protein. (223 aa)    
Predicted Functional Partners:
LOC100176589
DNA helicase; Belongs to the MCM family.
   
 0.660
F6PLC9_CIOIN
TIMELESS-interacting protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family.
   
 
 0.654
F6V4K8_CIOIN
WD_REPEATS_REGION domain-containing protein.
   
 
 0.640
F6YH93_CIOIN
Uncharacterized protein.
    
 
 0.618
F6WMB2_CIOIN
Uncharacterized protein.
    
 
 0.606
LOC100182084
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
 0.560
F6W6L5_CIOIN
MCM domain-containing protein; Belongs to the MCM family.
   
 0.520
F6W685_CIOIN
Uncharacterized protein.
   
 0.520
F6UIT3_CIOIN
Uncharacterized protein.
    
 0.483
cdc45
Uncharacterized protein.
    
 0.483
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.