STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2Y3J4_CIOINFlavokinase domain-containing protein. (181 aa)    
Predicted Functional Partners:
LOC100179492
FAD synthase.
    
 0.900
LOC100183100
Uncharacterized protein LOC100183100.
    
 0.837
F6UET6_CIOIN
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.739
H2XX92_CIOIN
Uncharacterized protein.
  
 
  0.711
F6Q301_CIOIN
Uncharacterized protein.
     
 0.696
LOC100182682
alpha-methylacyl-CoA racemase-like.
   
 
  0.674
F6YNT4_CIOIN
Coronin; Belongs to the WD repeat coronin family.
  
 
 0.673
H2XVI6_CIOIN
Uncharacterized protein.
   
 
  0.673
H2Y0Y4_CIOIN
Coronin; Belongs to the WD repeat coronin family.
  
 
 0.673
F7BJC2_CIOIN
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
     
 0.664
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.