Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C3XPP5_BRAFL | C3Y2C6_BRAFL | C3XPP5 | C3Y2C6 | Uncharacterized protein. | MIF4G domain-containing protein. | 0.773 |
C3XPP5_BRAFL | C3YD26_BRAFL | C3XPP5 | C3YD26 | Uncharacterized protein. | LsmAD domain-containing protein. | 0.883 |
C3XPP5_BRAFL | C3YJZ1_BRAFL | C3XPP5 | C3YJZ1 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.798 |
C3XPP5_BRAFL | C3YRF7_BRAFL | C3XPP5 | C3YRF7 | Uncharacterized protein. | Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. | 0.746 |
C3XPP5_BRAFL | C3YZV7_BRAFL | C3XPP5 | C3YZV7 | Uncharacterized protein. | 40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.703 |
C3XPP5_BRAFL | C3Z8A0_BRAFL | C3XPP5 | C3Z8A0 | Uncharacterized protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.747 |
C3XPP5_BRAFL | C3ZEK3_BRAFL | C3XPP5 | C3ZEK3 | Uncharacterized protein. | RRM domain-containing protein. | 0.699 |
C3XPP5_BRAFL | C3ZEZ1_BRAFL | C3XPP5 | C3ZEZ1 | Uncharacterized protein. | Uncharacterized protein. | 0.747 |
C3XPP5_BRAFL | PAN2 | C3XPP5 | C3YSK7 | Uncharacterized protein. | PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent [...] | 0.764 |
C3XPP5_BRAFL | PAN3 | C3XPP5 | C3XW74 | Uncharacterized protein. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.836 |
C3Y2C6_BRAFL | C3XPP5_BRAFL | C3Y2C6 | C3XPP5 | MIF4G domain-containing protein. | Uncharacterized protein. | 0.773 |
C3Y2C6_BRAFL | C3YJZ1_BRAFL | C3Y2C6 | C3YJZ1 | MIF4G domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.999 |
C3Y2C6_BRAFL | C3YZV7_BRAFL | C3Y2C6 | C3YZV7 | MIF4G domain-containing protein. | 40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.491 |
C3Y2C6_BRAFL | C3Z8A0_BRAFL | C3Y2C6 | C3Z8A0 | MIF4G domain-containing protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.649 |
C3Y2C6_BRAFL | C3ZEK3_BRAFL | C3Y2C6 | C3ZEK3 | MIF4G domain-containing protein. | RRM domain-containing protein. | 0.527 |
C3Y2C6_BRAFL | C3ZEZ1_BRAFL | C3Y2C6 | C3ZEZ1 | MIF4G domain-containing protein. | Uncharacterized protein. | 0.649 |
C3YD26_BRAFL | C3XPP5_BRAFL | C3YD26 | C3XPP5 | LsmAD domain-containing protein. | Uncharacterized protein. | 0.883 |
C3YD26_BRAFL | C3YJZ1_BRAFL | C3YD26 | C3YJZ1 | LsmAD domain-containing protein. | Nuclear cap-binding protein subunit 2. | 0.468 |
C3YJZ1_BRAFL | C3XPP5_BRAFL | C3YJZ1 | C3XPP5 | Nuclear cap-binding protein subunit 2. | Uncharacterized protein. | 0.798 |
C3YJZ1_BRAFL | C3Y2C6_BRAFL | C3YJZ1 | C3Y2C6 | Nuclear cap-binding protein subunit 2. | MIF4G domain-containing protein. | 0.999 |
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