STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XR78_BRAFLSld5 domain-containing protein. (196 aa)    
Predicted Functional Partners:
C3XTX5_BRAFL
Sld5 domain-containing protein.
   
 0.999
C3XZT5_BRAFL
DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family.
   
 0.999
C3ZB54_BRAFL
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
   
 0.999
C3Z3Y8_BRAFL
Uncharacterized protein.
   
 0.998
C3YAI9_BRAFL
DNA helicase; Belongs to the MCM family.
   
 0.997
C3Z4T9_BRAFL
DNA helicase; Belongs to the MCM family.
   
 0.996
C3ZSS5_BRAFL
DNA helicase; Belongs to the MCM family.
   
 0.996
C3YL40_BRAFL
DNA helicase; Belongs to the MCM family.
   
 0.991
C3ZN04_BRAFL
DNA polymerase epsilon subunit; Participates in DNA repair and in chromosomal DNA replication; Belongs to the DNA polymerase epsilon subunit B family.
   
 
 0.991
C3YGN3_BRAFL
WD_REPEATS_REGION domain-containing protein.
   
 
 0.982
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (20%) [HD]