STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XSY1_BRAFLTudor domain-containing protein. (957 aa)    
Predicted Functional Partners:
C3Z5S8_BRAFL
Uncharacterized protein; Belongs to the argonaute family.
   
 0.700
C3XYZ4_BRAFL
Uncharacterized protein.
    
0.628
C3Y0Q8_BRAFL
Uncharacterized protein.
    
 0.580
C3YT92_BRAFL
cAMP-dependent protein kinase; Belongs to the protein kinase superfamily.
    
 0.580
C3YPI5_BRAFL
Uncharacterized protein.
   
 
 0.571
C3ZDZ5_BRAFL
Uncharacterized protein.
      
 0.568
C3Z9D8_BRAFL
Peptidylprolyl isomerase.
     
 0.561
C3ZTE6_BRAFL
Uncharacterized protein.
     
 0.542
C3XV20_BRAFL
Uncharacterized protein; Belongs to the argonaute family.
   
 0.541
C3XV22_BRAFL
Uncharacterized protein.
   
 0.541
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.