STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XTG1_BRAFLUBIQUITIN_CONJUGAT_2 domain-containing protein. (138 aa)    
Predicted Functional Partners:
C3YK34_BRAFL
Uncharacterized protein.
   
 0.947
C3Y9I2_BRAFL
Uncharacterized protein.
   
 0.927
C3Y079_BRAFL
Ubiquitin thioesterase.
    
 0.917
C3Y2C9_BRAFL
Uncharacterized protein.
   
 0.891
C3YZR5_BRAFL
Uncharacterized protein.
   
 0.891
C3XXN0_BRAFL
RING-type domain-containing protein.
   
 0.871
gamt3
Ubiquitin-like domain-containing protein.
   
 0.802
C3ZH03_BRAFL
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
    
 0.774
C3YB87_BRAFL
CULLIN_2 domain-containing protein; Belongs to the cullin family.
   
 0.764
C3Z1D0_BRAFL
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.758
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.