STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XTM4_BRAFLRWD domain-containing protein. (237 aa)    
Predicted Functional Partners:
C3YJC7_BRAFL
OBG-type G domain-containing protein.
   
 
 0.996
C3ZZF1_BRAFL
Uncharacterized protein.
   
 
 0.804
C3YVY7_BRAFL
TOG domain-containing protein.
    
 
 0.750
C3XYM6_BRAFL
Uncharacterized protein.
   
  
 0.591
C3XUC8_BRAFL
RWD domain-containing protein.
    
 
 0.576
C3ZFN2_BRAFL
RWD domain-containing protein.
      
 0.571
DNPH1_BRAFL
Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1; Catalyzes the cleavage of the N-glycosidic bond of deoxyribonucleoside 5'-monophosphates to yield deoxyribose 5-phosphate and a purine or pyrimidine base.
      
 0.522
C3XQH0_BRAFL
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
  
 0.521
C3Y5S1_BRAFL
RING-type domain-containing protein.
      
 0.485
C3Z9E2_BRAFL
HTH cro/C1-type domain-containing protein.
      
 0.468
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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