STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XUZ2_BRAFLIon_trans domain-containing protein. (531 aa)    
Predicted Functional Partners:
C3Y082_BRAFL
Uncharacterized protein.
   
 0.990
C3YYR7_BRAFL
GuKc domain-containing protein.
   
 0.554
C3YMT5_BRAFL
ANAPC4_WD40 domain-containing protein.
    
 0.551
C3YV44_BRAFL
WD_REPEATS_REGION domain-containing protein.
   
 0.537
C3Z0T8_BRAFL
WD_REPEATS_REGION domain-containing protein.
    
 0.523
C3Y9G8_BRAFL
WD_REPEATS_REGION domain-containing protein.
    
 0.522
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.