STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XW19_BRAFLWD_REPEATS_REGION domain-containing protein. (343 aa)    
Predicted Functional Partners:
C3YT76_BRAFL
Uncharacterized protein.
   
 
 0.995
C3YNV2_BRAFL
Uncharacterized protein.
   
 0.985
C3YID2_BRAFL
WD_REPEATS_REGION domain-containing protein.
   
 
 0.928
C4A021_BRAFL
WD_REPEATS_REGION domain-containing protein.
   
 
 0.928
C3ZRF2_BRAFL
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 
 0.919
C3Y089_BRAFL
WD_REPEATS_REGION domain-containing protein.
  
  
 0.718
C3XZN6_BRAFL
Uncharacterized protein.
   
 
 0.698
C3YYM0_BRAFL
Uncharacterized protein.
   
 
 0.698
C3ZZK2_BRAFL
Uncharacterized protein.
   
 
 0.698
C3Z3Y8_BRAFL
Uncharacterized protein.
   
  
 0.697
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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