STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XXK6_BRAFLAAA domain-containing protein. (356 aa)    
Predicted Functional Partners:
C3YDK8_BRAFL
AAA domain-containing protein.
   
0.999
C3Z899_BRAFL
AAA domain-containing protein.
   
0.999
C3ZL26_BRAFL
AAA domain-containing protein.
   
0.999
C3ZRF2_BRAFL
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.999
C3ZI04_BRAFL
Uncharacterized protein.
   
 0.998
C3Y221_BRAFL
Uncharacterized protein.
   
 0.990
C3Y9A3_BRAFL
ATPase_AAA_core domain-containing protein.
   
 0.989
C3Y4Y3_BRAFL
BRCT domain-containing protein.
   
 0.986
C3Y7Z7_BRAFL
Checkpoint protein; Belongs to the HUS1 family.
   
 0.980
C3Y4Y4_BRAFL
Uncharacterized protein.
   
 0.979
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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