STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XXL1_BRAFLMFS domain-containing protein. (656 aa)    
Predicted Functional Partners:
C3YS62_BRAFL
Uncharacterized protein.
      
 0.575
C3ZCW0_BRAFL
Uncharacterized protein.
      
 0.573
C3YPZ8_BRAFL
Uncharacterized protein.
      
 0.537
C3XX70_BRAFL
Uncharacterized protein.
      
 0.526
C3Z8D7_BRAFL
MFS domain-containing protein.
      
 0.509
C3Y933_BRAFL
Peptidase S53 domain-containing protein.
      
 0.503
C3Y189_BRAFL
Id-1.
      
 0.502
C3Z9D2_BRAFL
MFS domain-containing protein.
      
 0.478
C3YNA7_BRAFL
Battenin.
    
 
 0.463
C4A0I4_BRAFL
Battenin.
    
 
 0.463
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.