STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XXT7_BRAFLUncharacterized protein. (3500 aa)    
Predicted Functional Partners:
C3YT18_BRAFL
Uncharacterized protein.
   
 0.797
C3Y3W4_BRAFL
Uncharacterized protein.
   
 0.784
C3XU17_BRAFL
Uncharacterized protein.
   
 0.783
C3YZU4_BRAFL
Uncharacterized protein.
   
 0.777
C3ZLS8_BRAFL
Uncharacterized protein.
   
 0.768
C3YM54_BRAFL
KH_dom_type_1 domain-containing protein.
   
 0.765
C3ZTA6_BRAFL
S1 motif domain-containing protein.
   
 0.760
C3ZLP6_BRAFL
HRDC domain-containing protein.
   
 0.757
C3Z6B1_BRAFL
Nudix hydrolase domain-containing protein.
  
 0.753
C3ZI76_BRAFL
Tr-type G domain-containing protein.
   
 0.741
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (20%) [HD]