STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XXW5_BRAFLPH domain-containing protein. (152 aa)    
Predicted Functional Partners:
C3XRP0_BRAFL
Uncharacterized protein.
    
 0.712
C3YS75_BRAFL
Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
      
 0.501
C3ZTH0_BRAFL
Fibrinogen C-terminal domain-containing protein.
    
 
 0.501
C3Z2H5_BRAFL
Uncharacterized protein.
      
 0.474
C3YBL3_BRAFL
Uncharacterized protein.
    
 0.470
C3YXB5_BRAFL
Uncharacterized protein.
    
 0.470
C3XU69_BRAFL
Uncharacterized protein.
      
 0.467
C3ZKM2_BRAFL
Uncharacterized protein.
      
 0.457
C3YEI4_BRAFL
G-patch domain-containing protein.
      
 0.447
C3Y680_BRAFL
DIRP domain-containing protein.
    
 0.425
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.