STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XYF0_BRAFLRNB domain-containing protein; Belongs to the RNR ribonuclease family. (813 aa)    
Predicted Functional Partners:
C3Y3W4_BRAFL
Uncharacterized protein.
   
 0.981
C3YZU4_BRAFL
Uncharacterized protein.
   
 0.980
C3XU58_BRAFL
Uncharacterized protein.
   
 0.979
C3YM54_BRAFL
KH_dom_type_1 domain-containing protein.
   
 0.979
C3ZTA6_BRAFL
S1 motif domain-containing protein.
   
 0.979
C3ZLS8_BRAFL
Uncharacterized protein.
   
 0.978
C3ZLP6_BRAFL
HRDC domain-containing protein.
   
 0.972
C3ZZA1_BRAFL
RNase_PH domain-containing protein.
   
 0.972
C3XU17_BRAFL
Uncharacterized protein.
   
 0.969
C3ZI76_BRAFL
Tr-type G domain-containing protein.
   
 0.944
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.