STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Y089_BRAFLWD_REPEATS_REGION domain-containing protein. (626 aa)    
Predicted Functional Partners:
C3ZMJ6_BRAFL
CPSF_A domain-containing protein.
    
 0.990
C3ZF52_BRAFL
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.987
C3ZRF2_BRAFL
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.978
C3YYS3_BRAFL
Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family.
   
  
 0.940
C3YGN3_BRAFL
WD_REPEATS_REGION domain-containing protein.
   
  
 0.937
C3XXN0_BRAFL
RING-type domain-containing protein.
    
 0.921
C3Z3Y8_BRAFL
Uncharacterized protein.
   
  
 0.895
C3YPG3_BRAFL
Mcm10 domain-containing protein.
   
  
 0.878
C3ZFR4_BRAFL
Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.
   
  
 0.862
C3XY57_BRAFL
WD_REPEATS_REGION domain-containing protein.
  
  
 0.841
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.