STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Y103_BRAFLUncharacterized protein. (380 aa)    
Predicted Functional Partners:
runt
Runt protein.
   
 0.933
C3XQD6_BRAFL
Paired box protein.
   
 
 0.898
C3YIH3_BRAFL
Paired domain-containing protein.
   
 
 0.819
C3Y189_BRAFL
Id-1.
     
 0.716
C3Z8S1_BRAFL
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.627
C3ZL29_BRAFL
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.627
C3YQP4_BRAFL
BZIP domain-containing protein; Belongs to the bZIP family.
   
 
 0.571
C3Y2E5_BRAFL
E2F_TDP domain-containing protein.
      
 0.527
C3ZEP1_BRAFL
Uncharacterized protein.
      
 0.523
C3ZMG1_BRAFL
E2F_TDP domain-containing protein.
      
 0.522
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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