STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Y166_BRAFLS1 motif domain-containing protein. (289 aa)    
Predicted Functional Partners:
C3XXY6_BRAFL
MPN domain-containing protein.
   
 0.999
C3Y0C8_BRAFL
W2 domain-containing protein.
   
 0.999
C3Y0H7_BRAFL
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
C3YFD3_BRAFL
eIF2B_5 domain-containing protein.
   
 0.999
C3YTF2_BRAFL
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.999
C3ZNT9_BRAFL
Tr-type G domain-containing protein.
   
 0.999
C3XWH9_BRAFL
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.998
C3YRF7_BRAFL
Eukaryotic translation initiation factor 3 subunit A; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.998
C3Z4N6_BRAFL
NTP_transferase domain-containing protein.
   
 0.998
C3ZNA0_BRAFL
Uncharacterized protein; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 0.998
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (24%) [HD]