STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Y1Q4_BRAFLUncharacterized protein. (946 aa)    
Predicted Functional Partners:
C3ZRQ2_BRAFL
Helicase ATP-binding domain-containing protein.
   
 0.999
C3Z4E3_BRAFL
WD_REPEATS_REGION domain-containing protein.
    
 0.998
C3ZI76_BRAFL
Tr-type G domain-containing protein.
    
 0.919
C3YT18_BRAFL
Uncharacterized protein.
   
 0.907
C3Y3W4_BRAFL
Uncharacterized protein.
     
 0.904
C3YZU4_BRAFL
Uncharacterized protein.
    
 0.901
C3ZLS8_BRAFL
Uncharacterized protein.
    
 0.896
C3Y0H7_BRAFL
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.866
C3XU58_BRAFL
Uncharacterized protein.
    
 0.865
C3XQF5_BRAFL
WD_REPEATS_REGION domain-containing protein.
    
   0.861
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.