STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Y5K8_BRAFLUncharacterized protein. (665 aa)    
Predicted Functional Partners:
C3YFI0_BRAFL
Uncharacterized protein.
    
 0.926
C3YU78_BRAFL
Uncharacterized protein.
   
 0.859
C3XUP1_BRAFL
FAD-binding FR-type domain-containing protein.
   
 0.722
C3YWN9_BRAFL
Uncharacterized protein.
      
0.709
C3YCT4_BRAFL
Uncharacterized protein.
      
0.700
C3XXS4_BRAFL
Uncharacterized protein.
   
 0.524
C3Z5E9_BRAFL
Uncharacterized protein.
   
 0.524
C3YJC1_BRAFL
Uncharacterized protein.
   
 0.447
C3YND5_BRAFL
Uncharacterized protein.
   
 0.447
C3ZH21_BRAFL
Uncharacterized protein.
   
 0.447
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.